Publications | Mark Neubauer

Featured Publications

$Electroweak diboson production in association with a high-mass dijet system in semileptonic final states from $pp$ collisions at $\sqrt{s} = 13$ TeV with the ATLAS detector. featured image$

High Energy Physics

Observation of vector boson scattering

This paper reports the observation of electroweak diboson ($WW/WZ/ZZ$) production in association with a high-mass dijet system, in which final states with one boson decaying …

Atlas Collaboration

• Jan 1, 2026 • 1 min read

Evidential deep learning for uncertainty quantification and out-of-distribution detection in jet identification using deep neural networks featured image

Artificial Intelligence

Evidential DL for Uncertainties and Anomaly Detection

Current methods commonly used for uncertainty quantification (UQ) in deep learning (DL) models utilize Bayesian methods which are computationally expensive and time-consuming. In …

Mark Neubauer

• Jul 1, 2025 • 1 min read

A detailed study of interpretability of deep neural network based top taggers featured image

Artificial Intelligence

Explainability of Deep Neural Networks in top quark tagging

Recent developments in the methods of explainable AI (XAI) allow researchers to explore the inner workings of deep neural networks (DNNs), revealing crucial information about …

Mark Neubauer

• Jan 1, 2023 • 1 min read

Applications and Techniques for Fast Machine Learning in Science featured image

Artificial Intelligence

Fast Machine Learning for Science

In this community review report, we discuss applications and techniques for fast machine learning (ML) in science—the concept of integrating powerful ML methods into the real-time …

Allison Mccarn Deiana

• Jan 1, 2022 • 1 min read

Selected Publications

Atlas Collaboration (2026). Electroweak diboson production in association with a high-mass dijet system in semileptonic final states from $pp$ collisions at $\sqrt{s} = 13$ TeV with the ATLAS detector.. European Physical Journal C.

Mark Neubauer, Ayush Khot, Xuwei Wang, Avik Roy, Vladimir Kindratenko (2025). Evidential deep learning for uncertainty quantification and out-of-distribution detection in jet identification using deep neural networks. Mach. Learn. Sci. Tech..

Devashri Naik, Nastaran Darabi, Sina Tayebati, Dinithi Jayasuriya, Shamma Nasrin, Danush Shekar, Corrinne Mills, Benjamin Parpillon, Farah Fahim, Mark Neubauer, Amit Ranjan Trivedi (2025). From Signals to Features to Insights: Multi-Level Novelty Detection for Fast Scientific Discovery. 2025 IEEE 43rd VLSI Test Symposium (VTS).

Jieun Yoo, Jennet Dickinson, Morris Swartz, Giuseppe Di Guglielmo, Alice Bean, Douglas Berry, Manuel. B. Valentin, Karri Dipetrillo, Farah Fahim, Lindsey Gray, James Hirschauer, Shruti R. Kulkarni, Ron Lipton, Petar Maksimovic, Corrinne Mills, Mark Neubauer, Benjamin Parpillon, Gauri Pradhan, Chinar Syal, Nhan Tran, Dahai Wen, Aaron Young (2024). Smart pixel sensors: towards on-sensor filtering of pixel clusters with deep learning. Mach. Learn. Sci. Tech..

K. M. Black, S. Jindariani, D. Li, F. Maltoni, P. Meade, D. Stratakis, D. Acosta, R. Agarwal, K. Agashe, C. Aime, D. Ally, A. Apresyan, A. Apyan, P. Asadi, D. Athanasakos, Y. Bao, N. Bartosik, E. Barzi, L. A. T. Bauerdick, J. Beacham, S. Belomestnykh, J. S. Berg, J. Berryhill, A. Bertolin, P. C. Bhat, M. E. Biagini, K. Bloom, T. Bose, A. Bross, E. Brost, N. Bruhwiler, L. Buonincontri, D. Buttazzo, V. Candelise, A. Canepa, R. Capdevilla, L. Carpenter, M. Casarsa, F. Celiberto, C. Cesarotti, G. Chachamis, Z. Chacko, P. Chang, S. v. Chekanov, T. Y. Chen, M. Chiesa, T. Cohen, M. Costa, N. Craig, A. Crivellin, C. Curatolo, D. Curtin, G. Da Molin, S. Dasu, A. De Gouvea, D. Denisov, R. Dermisek, K. F. Di Petrillo, T. Dorigo, J.m. Duarte, V.d. Elvira, R. Essig, P. Everaerts, J. Fan, M. Felcini, G. Fiore, D. Fiorina, M. Forslund, R. Franceschini, M. v. Garzelli, C. E. Gerber, L. Giambastiani, D. Giove, S. Guiducci, T. Han, K. Hermanek, C. Herwig, J. Hirschauer, T. R. Holmes, S. Homiller, L. A. Horyn, A. Ivanov, B. Jayatilaka, H. Jia, C. K. Jung, Y. Kahn, D. M. Kaplan, M. Kaur, M. Kawale, P. Koppenburg, G. Krintiras, K. Krizka, B. Kuchma, L. Lee, L. Li, P. Li, Q. Li, W. Li, R. Lipton, Z. Liu, S. Lomte, Q. Lu, D. Lucchesi, T. Luo, K. Lyu, Y. Ma, P. A. N. Machado, C. Madrid, D.j. Mahon, A. Mazzacane, N. Mcginnis, C. Mclean, B. Mele, F. Meloni, S. C. Middleton, R. K. Mishra, N. Mokhov, A. Montella, M. Morandin, S. Nagaitsev, F. Nardi, Mark Neubauer, D.v. Neuffer, H. Newman, R. Ogaz, I. Ojalvo, I. Oksuzian, T. Orimoto, B. Ozek, K. Pachal, S. Pagan Griso, P. Panci, V. Papadimitriou, N. Pastrone, K. Pedro, F. Pellemoine, A. Perloff, D. Pinna, F. Piccinini, Marc Andre Pleier, S. Posen, K. Potamianos, S. Rappoccio, M. Reece, L. Reina, A. Reinsvold Hall, C. Riccardi, L. Ristori, T. Robens, R. Ruiz, P. Sala, D. Schulte, L. Sestini, V. Shiltsev, P. Snopok, G. Stark, J. Stupak Iii, S. Su, R. Sundrum, M. Swiatlowski, M. J. Syphers, A. Taffard, W. Thompson, Y. Torun, C. G. Tully, I. Vai, M. Valente, U. Van Rienen, R. Van Weelderen, G. Velev, N. Venkatasubramanian, L. Vittorio, C. Vuosalo, X. Wang, H. Weber, R. Wu, Y. Wu, A. Wulzer, K. Xie, S. Xie, R. Yohay, K. Yonehara, F. Yu, A. v. Zlobin, D. Zuliani, J. Zurita (2024). Muon Collider Forum Report. Journal of Instrumentation.

Mark Neubauer, Ayush Khot, Avik Roy (2023). A detailed study of interpretability of deep neural network based top taggers. Mach. Learn. Sci. Tech..

W. Bhimji, D. Carder, E. Dart, J. Duarte, I. Fisk, R. Gardner, C. Guok, B. Jayatilaka, T. Lehman, M. Lin, C. Maltzahn, S. Mckee, Mark Neubauer, O. Rind, O Shadura, N. Tran, P. Van Gemmeren, G. Watts, B. A. Weaver, F. Wurthwein (2023). Computational Frontier Topical Group Report Storage and Processing Resource Access. Comput. Softw. Big Sci..

J. Duarte, H. Li, A. Roy, R. Zhu, E. A. Huerta, D. Diaz, P. Harris, R. Kansal, D. S. Katz, I. H. Kavoori, V. Kindratenko, F. Mokhtar, Mark Neubauer, S. E. Park, M. Quinnan, R. Rusack, Z. Zhao (2023). FAIR AI Models in High Energy Physics. Mach. Learn. Sci. Tech..

E. A. Huerta, B. Blaiszik, L. C. Brinson, K. E. Bouchard, D. Diaz, C. Doglioni, J. M. Duarte, M. Emani, I. Foster, G. Fox, P. Harris, L. Heinrich, S. Jha, D. S. Katz, V. Kindratenko, C. R. Kirkpatrick, K. Lassila Perini, R. K. Madduri, M. S. Neubauer, F. E. Psomopoulos, Avik Roy, O. Rubel, Z. Zhao, R. Zhu (2023). FAIR for AI: An interdisciplinary and international community building perspective. Scientific Data.

Mark Neubauer, Avik Roy, Zijun Wang (2023). Making digital objects FAIR in high energy physics: An implementation for Universal FeynRules Output models. SciPost Phys. Codebases.

Yifan Chen, E. A. Huerta, Javier Duarte, Philip Harris, Daniel S. Katz, Mark Neubauer, Daniel Diaz, Farouk Mokhtar, Raghav Kansal, Sang Eon Park, Volodymyr v. Kindratenko, Zhizhen Zhao, Roger Rusack (2022). A FAIR and AI-ready Higgs boson decay dataset. Sci. Data.

Allison Mccarn Deiana, Nhan Tran, Joshua Agar, Michaela Blott, Giuseppe Di Guglielmo, Javier Duarte, Philip Harris, Scott Hauck, Mia Liu, Mark Neubauer, Jennifer Ngadiuba, Seda Ogrenci Memik, Maurizio Pierini, Thea Aarrestad, Steffen Bahr, Jurgen Becker, Anne Sophie Berthold, Richard J. Bonventre, Tomas E. Muller Bravo, Markus Diefenthaler, Zhen Dong, Nick Fritzsche, Amir Gholami, Ekaterina Govorkova, Dongning Guo, Kyle J. Hazelwood, Christian Herwig, Babar Khan, Sehoon Kim, Thomas Klijnsma, Yaling Liu, Kin Ho Lo, Tri Nguyen, Gianantonio Pezzullo, Seyedramin Rasoulinezhad, Ryan A. Rivera, Kate Scholberg, Justin Selig, Sougata Sen, Dmitri Strukov, William Tang, Savannah Thais, Kai Lukas Unger, Ricardo Vilalta, Belinavon Krosigk, Belina Von Krosigk, Shen Wang, Thomas K. Warburton, Maria Acosta Flechas, Anthony Aportela, Thomas Calvet, Leonardo Cristella, Daniel Diaz, Caterina Doglioni, Maria Domenica Galati, Elham E. Khoda, Farah Fahim, Davide Giri, Benjamin Hawks, Duc Hoang, Burt Holzman, Shih Chieh Hsu, Sergo Jindariani, Iris Johnson, Raghav Kansal, Ryan Kastner, Erik Katsavounidis, Jeffrey Krupa, Pan Li, Sandeep Madireddy, Ethan Marx, Patrick Mccormack, Andres Meza, Jovan Mitrevski, Mohammed Attia Mohammed, Farouk Mokhtar, Eric Moreno, Srishti Nagu, Rohin Narayan, Noah Palladino, Zhiqiang Que, Sang Eon Park, Subramanian Ramamoorthy, Dylan Rankin, Simon Rothman, Ashish Sharma, Sioni Summers, Pietro Vischia, Jean Roch Vlimant, Olivia Weng (2022). Applications and Techniques for Fast Machine Learning in Science. Front. Big Data.

Abdelrahman Elabd, Vesal Razavimaleki, Shi Yu Huang, Javier Duarte, Markus Atkinson, Gage Dezoort, Peter Elmer, Scott Hauck, Jin Xuan Hu, Shih Chieh Hsu, Bo Cheng Lai, Mark Neubauer, Isobel Ojalvo, Savannah Thais, Matthew Trahms (2022). Graph Neural Networks for Charged Particle Tracking on FPGAs. Front. Big Data.

Ben Nachman, Salvatore Rappoccio, Nhan Tran, Johan Bonilla, Grigorios Chachamis, Barry M. Dillon, Sergei v. Chekanov, Robin Erbacher, Loukas Gouskos, Andreas Hinzmann, Stefan Hoche, B. Todd Huffman, Ashutosh. v. Kotwal, Deepak Kar, Roman Kogler, Clemens Lange, Matt Leblanc, Roy Lemmon, Christine Mclean, Mark Neubauer, Tilman Plehn, Debarati Roy, Giordan Stark, Jennifer Roloff, Marcel Vos, Chih Hsiang Yeh, Shin Shan Yu (2022). Jets and Jet Substructure at Future Colliders. Front. in Phys..

Kyle Cranmer, Sabine Kraml, Harrison B. Prosper, Philip Bechtle, Florian U. Bernlochner, Itay M. Bloch, Enzo Canonero, Marcin Chrzaszcz, Andrea Coccaro, Jan Conrad, Glen Cowan, Matthew Feickert, Nahuel Ferreiro Iachellini, Andrew Fowlie, Lukas Heinrich, Alexander Held, Thomas Kuhr, Anders Kvellestad, Maeve Madigan, Farvah Mahmoudi, Knut Dundas Mora, Mark Neubauer, Maurizio Pierini, Juan Rojo, Sezen Sekmen, Luca Silvestrini, Veronica Sanz, Giordon Stark, Riccardo Torre, Robert Thorne, Wolfgang Waltenberger, Nicholas Wardle, Jonas Wittbrodt (2022). Publishing statistical models: Getting the most out of particle physics experiments. SciPost Phys..

G. Dezoort, S. Thais, J. Duarte, V. Razavimaleki, M. Atkinson, I. Ojalvo, M. S. Neubauer, P. Elmer (2021). Charged Particle Tracking via Edge-Classifying Interaction Networks. Comput. Softw. Big Sci..

Xiangyang Ju, Daniel Murnane, Paolo Calafiura, Nicholas Choma, Sean Conlon, Steve Farrell, Yaoyuan Xu, Maria Spiropulu, Jean Roch Vlimant, Adam Aurisano, V Hewes, Giuseppe Cerati, Lindsey Gray, Thomas Klijnsma, Jim Kowalkowski, Markus Atkinson, Mark Neubauer, Gage Dezoort, Savannah Thais, Aditi Chauhan, Alex Schuy, Shih Chieh Hsu, Alex Ballow, Alina Lazar (2021). Performance of a geometric deep learning pipeline for HL-LHC particle tracking. Eur. Phys. J. C.

Atlas Collaboration (2021). The ATLAS Fast TracKer system. JINST.

Aneesh Heintz, Vesal Razavimaleki, Javier Duarte, Gage Dezoort, Isobel Ojalvo, Savannah Thais, Markus Atkinson, Mark Neubauer, Lindsey Gray, Sergo Jindariani, Nhan Tran, Philip Harris, Dylan Rankin, Thea Aarrestad, Vladimir Loncar, Maurizio Pierini, Sioni Summers, Jennifer Ngadiuba, Mia Liu, Edward Kreinar, Zhenbin Wu (2020). Accelerated Charged Particle Tracking with Graph Neural Networks on FPGAs. 34th Conference on Neural Information Processing Systems (NeurIPS) 2020.

B. Di Micco, M. Gouzevitch, J. Mazzitelli, C. Vernieri, J. Alison, K. Androsov, J. Baglio, E. Bagnaschi, S. Banerjee, P. Basler, A. Bethani, A. Betti, M. Blanke, A. Blondel, L. Borgonovi, E. Brost, P. Bryant, G. Buchalla, T. J. Burch, V. M. M. Cairo, F. Campanario, M. Carena, A. Carvalho, N. Chernyavskaya, V. Damico, S. Dawson, N. De Filippis, L. Di Luzio, S. Di Vita, B. Dillon, C. Englert, A. Ferrari, E. Fontanesi, H. Fox, M. Gallinaro, P. P. Giardino, S. Glaus, F. Goertz, S. Gori, R. Grober, C. Grojean, D. F. Guerrero Ibarra, R. Gupta, U. Haisch, G. Heinrich, P. Huang, P. Janot, S. P. Jones, M. A. Kagan, S. Kast, M. Kerner, J. H. Kim, K. Kong, J. Kozaczuk, F. Krauss, S. Kuttimalai, H. M. Lee, K. Leney, I. M. Lewis, S. Liebler, Z. Liu, H. E. Logan, A. Long, F. Maltoni, S. Manzoni, L. Mastrolorenzo, K. Matchev, F. Micheli, M. Muhlleitner, Mark Neubauer, G. Ortona, M. Osherson, D. Pagani, G. Panico, A. Papaefstathiou, M. Park, M. E. Peskin, J. Quevillon, M. Riembau, T. Robens, P. Roloff, H. Rzehak, J. Schaarschmidt, U. Schnoor, L. Scyboz, M. Selvaggi, N. R. Shah, A. Shivaji, S. Shrestha, K. Sinha, M. Spannowsky, M. Spira, T. Stefaniak, J. Streicher, M. Sullivan, M. Swiatlowski, R. Teixeira De Lima, J. Thomson, J. Tian, T. Vantalon, C. Veelken, T. Vickey, E. Vryonidou, J. Wells, S. Westhoff, X. Zhao, J. Zurita (2020). Higgs boson potential at colliders: Status and perspectives. Rev. Phys..

Hep Software Foundation (2019). A Roadmap for HEP Software and Computing R&D for the 2020s. Journal of Computing and Software for Big Science.

Gabrielle Allen, Igor Andreoni, Etienne Bachelet, G. Bruce Berriman, Federica B. Bianco, Rahul Biswas, Matias Carrasco Kind, Kyle Chard, Minsik Cho, Philip S. Cowperthwaite, Zachariah B. Etienne, Daniel George, Tom Gibbs, Matthew Graham, William Gropp, Anushri Gupta, Roland Haas, E. A. Huerta, Elise Jennings, Daniel S. Katz, Asad Khan, Volodymyr Kindratenko, William T. C. Kramer, Xin Liu, Ashish Mahabal, Kenton Mchenry, J. M. Miller, Mark Neubauer, Steve Oberlin, Alexander R. Olivas Jr, Shawn Rosofsky, Milton Ruiz, Aaron Saxton, Bernard Schutz, Alex Schwing, Ed Seidel, Stuart L. Shapiro, Hongyu Shen, Yue Shen, Brigitta M. Sipocz, Lunan Sun, John Towns, Antonios Tsokaros, Wei Wei, Jack Wells, Timothy J. Williams, Jinjun Xiong, Zhizhen Zhao (2019). Deep Learning for Multi-Messenger Astrophysics: A Gateway for Discovery in the Big Data Era.

E. A. Huerta, Gabrielle Allen, Igor Andreoni, Javier M. Antelis, Etienne Bachelet, G. Bruce Berriman, Federica B. Bianco, Rahul Biswas, Matias Carrasco Kind, Kyle Chard Minsik Cho, Philip S. Cowperthwaite, Zachariah B. Etienne, Maya Fishbach, Francisco Forster, Daniel George, Tom Gibbs, Matthew Graham, William Gropp, Robert Gruendl, Anushri Gupta, Roland Haas, Sarah Habib, Elise Jennings, Margaret W. G. Johnson, Erik Katsavounidis, Daniel S. Katz, Asad Khan, Volodymyr Kindratenko, William T. C. Kramer, Xin Liu, Ashish Mahabal, Zsuzsa Marka, Kenton Mchenry, J. M. Miller, Claudia Moreno, Mark Neubauer, Steve Oberlin, Alexander R. Olivas Jr, Donald Petravick, Adam Rebei, Shawn Rosofsky, Milton Ruiz, Aaron Saxton, Bernard F. Schutz, Alex Schwing, Ed Seidel, Stuart L. Shapiro, Hongyu Shen, Yue Shen, Leo P. Singer, Brigitta M. Sipocz, Lunan Sun, John Towns, Antonios Tsokaros, Wei Wei, Jack Wells, Timothy J. Williams, Jinjun Xiong, Zhizhen Zhao (2019). Enabling Real-time Multi-messenger Astrophysics Discoveries with Deep Learning. Nature Rev. Phys..

Atlas Collaboration (2019). Search for Higgs boson decays into a pair of light bosons in the $bb\mu\mu$ final state in $pp$ collision at $\sqrt{s} = $13 TeV. Phys. Lett..

Atlas Collaboration (2019). Search for Higgs boson pair production in the $b\bar{b}WW^*$ decay mode at $\sqrt{s}=13$ TeV with the ATLAS detector. JHEP.

G. Aad %5cem Et Al. Atlas Collaboration (2019). Search for the electroweak diboson production in association with a high-mass dijet system in semileptonic final states in $pp$ collisions at $sqrts=13$ TeV with the ATLAS detector. Phys. Rev..

E. A. Huerta, R. Haas, J. Jha, Mark Neubauer, D. S. Katz (2019). Supporting High-Performance and High-Throughput Computing for Experimental Science. Comput. Softw. Big Sci..

Atlas Collaboration (2018). Combination of searches for heavy resonances decaying into bosonic and leptonic final states using 36 fb$^-1$ of proton-proton collision data at $sqrts = 13$ TeV with the ATLAS detector. Phys. Rev..

Maxim Belkin, Roland Haas, Galen Wesley Arnold, Hon Wai Leong, Eliu A. Huerta, David Lesny, Mark Neubauer (2018). Container solutions for HPC Systems: A Case Study of Using Shifter on Blue Waters. CoRR.

Lothar Bauerdick, Riccardo Maria Bianchi, Brian Bockelman, Nuno Castro, Kyle Cranmer, Peter Elmer, Robert Gardner, Maria Girone, Oliver Gutsche, Benedikt Hegner, Jose M. Hernandez, Bodhitha Jayatilaka, David Lange, Mark Neubauer, Daniel S. Katz, Lukasz Kreczko, James Letts, Shawn Mckee, Christoph Paus, Kevin Pedro, Jim Pivarski, Martin Ritter, Eduardo Rodrigues, Tai Sakuma, Elizabeth Sexton Kennedy, Michael D. Sokoloff, Carl Vuosalo, Frank Wurthwein, Gordon Watts (2018). HEP Software Foundation Community White Paper Working Group - Data Analysis and Interpretation.

Atlas Collaboration (2018). Search for $WW/WZ$ resonance production in $\ell\nu qq$ final states in $pp$ collisions at $\sqrt{s} =$ 13 TeV with the ATLAS detector. JHEP.

Atlas Collaboration (2018). Searches for heavy $ZZ$ and $ZW$ resonances in $\ell\ell qq$ and $\nu\nu qq$ final states in $pp$ collisions at $\sqrt{s}=13$ TeV with the ATLAS detector. JHEP.

Atlas Collaboration (2017). Search for new resonances decaying to a $W$ or $Z$ boson and a Higgs boson in the $\ell^+ \ell^- b\bar{b}$, $\ell\nu b\bar{b}$, and $\nu\bar{\nu} b\bar{b}$ channels with $pp$ collisions at $\sqrt{s} = 13$ TeV with the ATLAS detector. Phys. Lett..

Peter Elmer, Mark Neubauer, Michael D. Sokoloff (2017). Strategic Plan for a Scientific Software Innovation Institute (S2I2) for High Energy Physics.

Atlas Collaboration (2016). Searches for heavy diboson resonances in $pp$ collisions at $\sqrt{s}=13$ TeV with the ATLAS detector. JHEP.

Atlas Collaboration (2015). Observation and measurement of Higgs boson decays to $WW^*$ with the ATLAS etector. Phys. Rev..

Atlas Collaboration (2013). Search for charged Higgs bosons through the violation of lepton universality in $tbart$ events using $pp$ collision data at $\sqrt{s}=7$ TeV. JHEP.

Atlas Collaboration (2012). Observation of a new particle in the search for the Standard Model Higgs boson with the ATLAS detector at the LHC. Phys. Lett..

Atlas Collaboration (2012). Search for charged Higgs bosons decaying via $H^+ \to \tau\nu$ in top quark pair events using $pp$ collision data at $\sqrt{s}=7$ TeV with the ATLAS detector. JHEP.

John D Hobbs, Mark Neubauer, Scott Willenbrock (2012). Tests of the Standard Electroweak Model at the Energy Frontier. Rev. Mod. Phys..

Mark Neubauer (2011). Diboson production at colliders. Ann. Rev. Nucl. Part. Sci..

Cdf Collaboration (2008). First Measurement of $ZZ$ Production in $p\bar{p}$ Collisions at $\sqrt{s}$ = 1.96 TeV. Phys. Rev. Lett..

Cdf Collaboration (2007). Measurement of the $\Lambda^0_b$ Lifetime in $\Lambda^0_b \to J/\psi \Lambda^0$ in $p\bar{p}$ Collisions at $\sqrt{s}$ = 1.96 TeV. Phys. Rev. Lett..

Cdf Collaboration (2007). Observation of $WZ$ Production. Phys. Rev. Lett..

Sudbury Neurtrino Observatory Collaboration (2001). Measurement of the rate of $\nu_e + d \to p+p + e^-$ interactions produced by $^8$B solar neutrinos at the Sudbury Neutrino Observatory. Phys. Rev. Lett..

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